Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | EJA05_RS11965 | Not Available | Negative | 2557259 - 2558638 | 49994.5 |
| aspartate aminotransferase family protein | EJA05_RS11970 | Not Available | Negative | 2558780 - 2560162 | 50856.9 |
| mfs transporter | EJA05_RS11975 | Not Available | Negative | 2560370 - 2561743 | 49709.5 |
| 3-dehydroshikimate dehydratase quic | EJA05_RS11980 | Not Available | Positive | 2562251 - 2564158 | 70203.5 |
| tetr/acrr family transcriptional regulator | EJA05_RS11985 | Not Available | Positive | 2564399 - 2565061 | 25340.5 |
| shikimate dehydrogenase | EJA05_RS11990 | Not Available | Negative | 2565117 - 2565965 | 29798.0 |
| type ii 3-dehydroquinate dehydratase | EJA05_RS11995 | Not Available | Negative | 2565962 - 2566408 | 16232.5 |
| tolc family protein | EJA05_RS12000 | Not Available | Positive | 2566755 - 2567957 | 43072.1 |
| efflux rnd transporter periplasmic adaptor subunit | EJA05_RS12005 | Not Available | Positive | 2568078 - 2569304 | 43286.5 |
| efflux rnd transporter permease subunit | EJA05_RS12010 | Not Available | Positive | 2569320 - 2572478 | 113278.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





