Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Com translational regulator | EJA05_RS28500 | Not Available | Negative | 4655372 - 4655518 | 5326.44 |
| Putative baseplate assembly protein v | EJA05_RS21860 | Not Available | Negative | 4655551 - 4656153 | 20972.6 |
| Conserved phage protein | EJA05_RS21865 | Not Available | Negative | 4656150 - 4656647 | 17991.3 |
| phage holin family protein | EJA05_RS21870 | Not Available | Negative | 4656644 - 4656997 | 12697.7 |
| Putative cro/ci transcriptional regulator | EJA05_RS21875 | Not Available | Negative | 4657466 - 4658212 | 27985.1 |
| Putative mismatch repair protein | EJA05_RS21880 | Not Available | Positive | 4658354 - 4660927 | 94953.7 |
| ferredoxin fdxa | EJA05_RS21885 | Not Available | Positive | 4661067 - 4661390 | 12048.1 |
| Rna polymerase sigma factor | EJA05_RS21890 | Not Available | Negative | 4661858 - 4662865 | 38257.8 |
| Peptidase m23 | EJA05_RS21895 | Not Available | Negative | 4662971 - 4663828 | 29815.5 |
| chromosomal replication initiator protein dnaa | EJA05_RS00005 | Not Available | Positive | 100 - 1632 | 57191.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





