Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | EJA05_RS07875 | Not Available | Negative | 1668243 - 1668698 | 16953.8 |
| lysr family transcriptional regulator | EJA05_RS07880 | Not Available | Negative | 1668754 - 1669710 | 34794.9 |
| sulfite exporter taue/safe family protein | EJA05_RS07885 | Not Available | Positive | 1669826 - 1670575 | 26432.3 |
| lysr substrate-binding domain-containing protein | EJA05_RS07890 | Not Available | Negative | 1670650 - 1671501 | 31840.7 |
| duf1127 domain-containing protein | EJA05_RS07895 | Not Available | Positive | 1671598 - 1671816 | 8450.94 |
| winged helix-turn-helix domain-containing protein | EJA05_RS07900 | Not Available | Positive | 1672476 - 1673696 | 45683.8 |
| class ii 3-deoxy-7-phosphoheptulonate synthase | EJA05_RS07905 | Not Available | Negative | 1673677 - 1675023 | 49704.2 |
| spermidine synthase | EJA05_RS07910 | Not Available | Positive | 1675141 - 1675896 | 28154.6 |
| hydrolase | EJA05_RS07915 | Not Available | Positive | 1676289 - 1678008 | 62005.8 |
| doda-type extradiol aromatic ring-opening family dioxygenase | EJA05_RS07920 | Not Available | Negative | 1678163 - 1678915 | 27171.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





