Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase assembly factor 2 | EJA05_RS05605 | Not Available | Positive | 1180571 - 1180825 | 10205.3 |
| protein ygfx | EJA05_RS05610 | Not Available | Positive | 1180809 - 1181261 | 17233.3 |
| l-aspartate oxidase | EJA05_RS05615 | Not Available | Negative | 1181230 - 1182846 | 59669.8 |
| rna polymerase sigma factor rpoe | EJA05_RS05620 | Not Available | Positive | 1183284 - 1183865 | 22267.3 |
| sigma-e factor negative regulatory protein | EJA05_RS05625 | Not Available | Positive | 1183897 - 1184487 | 21011.7 |
| mucb/rseb c-terminal domain-containing protein | EJA05_RS05630 | Not Available | Positive | 1184499 - 1185464 | 35228.9 |
| degq family serine endoprotease | EJA05_RS05635 | Not Available | Positive | 1185664 - 1187064 | 49656.8 |
| translation elongation factor 4 | EJA05_RS05640 | Not Available | Positive | 1187338 - 1189137 | 66096.8 |
| signal peptidase i | EJA05_RS05645 | Not Available | Positive | 1189143 - 1189997 | 32120.3 |
| ribonuclease iii | EJA05_RS05650 | Not Available | Positive | 1190158 - 1190847 | 25646.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





