Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EJA05_RS05310 | Not Available | Positive | 1116804 - 1118150 | 47079.5 |
| coa transferase subunit a | EJA05_RS05315 | Not Available | Positive | 1118420 - 1119280 | 31065.2 |
| coa-transferase subunit beta | EJA05_RS05320 | Not Available | Positive | 1119277 - 1120056 | 27058.3 |
| 3-oxoadipyl-coa thiolase | EJA05_RS05325 | Not Available | Positive | 1120053 - 1121258 | 41995.8 |
| mfs family transporter | EJA05_RS05330 | Not Available | Positive | 1121430 - 1122719 | 46716.6 |
| 3-carboxy-cis,cis-muconate cycloisomerase | EJA05_RS05335 | Not Available | Positive | 1122729 - 1124081 | 48246.4 |
| 3-oxoadipate enol-lactonase | EJA05_RS05340 | Not Available | Positive | 1124093 - 1124884 | 28171.5 |
| 4-carboxymuconolactone decarboxylase | EJA05_RS05345 | Not Available | Positive | 1124896 - 1125288 | 14816.7 |
| duf962 domain-containing protein | EJA05_RS05350 | Not Available | Negative | 1125399 - 1125923 | 18793.4 |
| crp/fnr family transcriptional regulator | EJA05_RS05355 | Not Available | Positive | 1126015 - 1126701 | 25792.3 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





