Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryziphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1094909 bp
Thymine Count
1097240 bp
Guanine Count
1926409 bp
Cytosine Count
1931046 bp
Genome Length
6049604 bp
Protein-coding Genes
5325 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy-associated tm helix domain-containing protein | EJA05_RS04645 | Not Available | Positive | 969224 - 970786 | 57031.4 |
| duf3325 domain-containing protein | EJA05_RS04650 | Not Available | Positive | 970786 - 971112 | 11333.6 |
| rna polymerase sigma factor | EJA05_RS04655 | Not Available | Positive | 971117 - 971692 | 21522.8 |
| fecr family protein | EJA05_RS04660 | Not Available | Positive | 971689 - 972660 | 35374.1 |
| tonb-dependent siderophore receptor | EJA05_RS04665 | Not Available | Positive | 972878 - 975280 | 87478.6 |
| helix-turn-helix domain-containing protein | EJA05_RS04670 | Not Available | Negative | 975371 - 976246 | 32386.9 |
| dmt family transporter | EJA05_RS04675 | Not Available | Positive | 976456 - 977358 | 32448.0 |
| 2-hydroxyacid dehydrogenase | EJA05_RS04680 | Not Available | Negative | 977461 - 978435 | 34709.9 |
| lysr family transcriptional regulator | EJA05_RS04685 | Not Available | Negative | 978579 - 979526 | 34901.9 |
| efflux transporter outer membrane subunit | EJA05_RS04690 | Not Available | Positive | 979707 - 981245 | 54953.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





