Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Alloyangia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Alloyangia |
| Species | Alloyangia pacifica |
| Strain | YSBP01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alloyangia pacifica strain YSBP01 plasmid unnamed2, complete
Gene Summary
Adenine Count
32546 bp
Thymine Count
32919 bp
Guanine Count
68683 bp
Cytosine Count
71143 bp
Genome Length
205291 bp
Protein-coding Genes
199 genes
Non-Coding Genes
5 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | CEW88_RS21715 | Not Available | Positive | 51008 - 51730 | 26154.0 |
| ldh family oxidoreductase | CEW88_RS21720 | Not Available | Negative | 51831 - 52868 | 36155.3 |
| helix-turn-helix domain-containing protein | CEW88_RS21725 | Not Available | Negative | 52926 - 53561 | 23923.2 |
| aconitase x | CEW88_RS21730 | Not Available | Positive | 53720 - 55429 | 59733.1 |
| dihydrodipicolinate synthase family protein | CEW88_RS21735 | Not Available | Positive | 55480 - 56439 | 34605.6 |
| proline racemase family protein | CEW88_RS21740 | Not Available | Positive | 56430 - 57362 | 32251.3 |
| nad(p)/fad-dependent oxidoreductase | CEW88_RS21745 | Not Available | Positive | 57438 - 58688 | 45163.1 |
| trans-3-hydroxy-l-proline dehydratase | CEW88_RS21750 | Not Available | Negative | 58717 - 59760 | 37496.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 60211 - 60325 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 60439 - 63270 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.