Alloyangia pacifica str. YSBP01

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Alloyangia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusAlloyangia
SpeciesAlloyangia pacifica
StrainYSBP01

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alloyangia pacifica strain YSBP01 plasmid unnamed2, complete

Gene Summary

Adenine Count

32546 bp

Thymine Count

32919 bp

Guanine Count

68683 bp

Cytosine Count

71143 bp

Genome Length

205291 bp

Protein-coding Genes

199 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseCEW88_RS17030Not AvailableNegative875547 - 87644932060.4
tetr/acrr family transcriptional regulatorCEW88_RS17035Not AvailablePositive876625 - 87731425831.1
aspartate/glutamate racemase family proteinCEW88_RS17040Not AvailableNegative877311 - 87799423516.7
trap transporter large permeaseCEW88_RS17045Not AvailableNegative878045 - 87937047011.6
tyrosine-type recombinase/integraseCEW88_RS24945Not AvailableNegative879557 - 87997014824.1
trap transporter substrate-binding proteinCEW88_RS17050Not AvailableNegative880117 - 88109134328.4
fepa family tonb-dependent siderophore receptorCEW88_RS17055Not AvailablePositive881506 - 88380682555.9
class 1b ribonucleoside-diphosphate reductase subunit betaCEW88_RS17060Not AvailableNegative883952 - 88492636734.1
class 1b ribonucleoside-diphosphate reductase subunit alphaCEW88_RS17065Not AvailableNegative885047 - 88717079650.9
class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdiCEW88_RS17070Not AvailableNegative887155 - 88756814677.7

Displaying genes 3891 – 3900 of 4326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.