Alloyangia pacifica str. YSBP01

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Alloyangia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusAlloyangia
SpeciesAlloyangia pacifica
StrainYSBP01

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alloyangia pacifica strain YSBP01 plasmid unnamed2, complete

Gene Summary

Adenine Count

32546 bp

Thymine Count

32919 bp

Guanine Count

68683 bp

Cytosine Count

71143 bp

Genome Length

205291 bp

Protein-coding Genes

199 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan d,d-transpeptidase ftsi family proteinCEW88_RS05005Not AvailablePositive1028730 - 103052364951.0
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseCEW88_RS05010Not AvailablePositive1030593 - 103208651604.4
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseCEW88_RS05015Not AvailablePositive1032083 - 103351350352.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseCEW88_RS05020Not AvailablePositive1033532 - 103461438529.0
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseCEW88_RS05025Not AvailablePositive1034740 - 103614349036.0
hypothetical proteinCEW88_RS05030Not AvailableNegative1036165 - 103683325116.2
nad(p)/fad-dependent oxidoreductaseCEW88_RS05035Not AvailableNegative1036902 - 103808041750.9
putative peptidoglycan glycosyltransferase ftswCEW88_RS05040Not AvailablePositive1038246 - 103941241585.7
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseCEW88_RS05045Not AvailablePositive1039569 - 104077142599.1
udp-n-acetylmuramate--l-alanine ligaseCEW88_RS05050Not AvailablePositive1040804 - 104220150041.7

Displaying genes 1491 – 1500 of 4326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.