Alloyangia pacifica str. YSBP01

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Alloyangia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusAlloyangia
SpeciesAlloyangia pacifica
StrainYSBP01

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alloyangia pacifica strain YSBP01 plasmid unnamed2, complete

Gene Summary

Adenine Count

32546 bp

Thymine Count

32919 bp

Guanine Count

68683 bp

Cytosine Count

71143 bp

Genome Length

205291 bp

Protein-coding Genes

199 genes

Non-Coding Genes

5 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l28CEW88_RS04190Not AvailablePositive876810 - 87710010365.6
copper chaperone pcu(a)cCEW88_RS04195Not AvailablePositive877303 - 87773414634.6
nad-dependent deacylaseCEW88_RS04200Not AvailableNegative877724 - 87844625138.6
low molecular weight protein-tyrosine-phosphataseCEW88_RS04205Not AvailablePositive878534 - 87898916559.7
acyloxyacyl hydrolaseCEW88_RS04210Not AvailablePositive879119 - 87964018960.4
isoleucine--trna ligaseCEW88_RS04215Not AvailableNegative879898 - 882882112351.0
ycjf family proteinCEW88_RS04220Not AvailableNegative883896 - 88493036240.4
gnat family n-acetyltransferaseCEW88_RS04225Not AvailableNegative884927 - 88539716872.9
ycjx family proteinCEW88_RS04230Not AvailableNegative885394 - 88682152353.8
trna pseudouridine(38-40) synthase truaCEW88_RS04235Not AvailablePositive887021 - 88779127979.2

Displaying genes 1371 – 1380 of 4326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.