Thermotoga neapolitana DSM 4359

Gram-negativeRodNon-motileMicroaerophilic

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Thermotogales

Family

Thermotogaceae

Genus

Thermotoga

Description

Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) is a hyperthermophilic bacterium isolated from black smoker in the bay near Naples, Italy. This organism, like other Thermotoga, produces a vast quantity of hydrogen in batch culture. It is being considered for use in projects to utilize waste carboydrates for the production of hydrogen gas for industrial purposes. A number of thermostable enzymes such as alkaline phosphatase are also produced by this bacterium and may be of use for industrial purposes. (adapted from : http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=21023). (HAMAP: THENN)

Taxonomy

KingdomThermotogati
PhylumThermotogota
ClassThermotogae
OrderThermotogales
FamilyThermotogaceae
GenusThermotoga
SpeciesThermotoga neapolitana
StrainDSM 4359

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Thermotoga neapolitana DSM 4359
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature70
Temperature rangeHyperthermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Thermotoga neapolitana DSM 4359, complete sequence.

Gene Summary

Adenine Count

499409 bp

Thymine Count

500494 bp

Guanine Count

440015 bp

Cytosine Count

444644 bp

Genome Length

1884562 bp

Protein-coding Genes

1907 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCTN_RS06325Not AvailablePositive1222779 - 122434160665.3
type ii toxin-antitoxin system hicb family antitoxinCTN_RS06330Not AvailablePositive1224438 - 12246568215.84
type ii toxin-antitoxin system hica family toxinCTN_RS06335Not AvailablePositive1224686 - 12248355804.12
abc transporter atp-binding proteinCTN_RS06340Not AvailableNegative1224919 - 122661363841.2
abc transporter atp-binding proteinCTN_RS06345Not AvailableNegative1226633 - 122835165443.0
radical sam/spasm domain-containing proteinCTN_RS06350Not AvailableNegative1228357 - 122974854236.0
cys-rich ripp peptideCTN_RS10210Not AvailableNegative1229850 - 12299453177.97
hypothetical proteinCTN_RS09940Not AvailableNegative1230022 - 12301866229.75
helix-turn-helix domain-containing proteinCTN_RS06355Not AvailablePositive1230382 - 123203164676.3
type ii toxin-antitoxin system hicb family antitoxinCTN_RS06360Not AvailablePositive1232044 - 12322628215.84

Displaying genes 1281 – 1290 of 1961 in total

Metabolites

793 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 793 metabolites

Health Effects

No health effects information available for this bacterium.