Thermomicrobium roseum DSM 5159 str. DSM5159

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Thermomicrobiota

Class

Thermomicrobia

Order

Thermomicrobiales

Family

Thermomicrobiaceae

Genus

Thermomicrobium

Description

Thermomicrobium roseum DSM 5159 str. DSM5159 is a Gram-negative, rod-shaped bacterium characterized by its unique cellular arrangement, which occurs predominantly in pairs or as single cells. This microbe thrives optimally at a temperature of 70.0°C, indicating its preference for thermophilic environments. As an aerobe, Thermomicrobium roseum requires oxygen for its metabolic processes, aligning it with other organisms adapted to high-temperature habitats where oxygen is available. The specific habitat of Thermomicrobium roseum is described as specialized, suggesting that it occupies a niche that may be distinct from more common microbial environments. This specialization may confer advantages in terms of competition and survival in extreme conditions, potentially influencing biogeochemical cycles in its ecosystem. Understanding the traits of Thermomicrobium roseum provides insight into the adaptations required for life in high-temperature, oxygen-rich environments. Its unique metabolic requirements and thermal tolerance may play a vital role in the microbial community structure and function in geothermal ecosystems, highlighting the importance of thermophilic microbes in nutrient cycling and energy flow in extreme habitats.

Taxonomy

KingdomPseudomonadati
PhylumThermomicrobiota
ClassThermomicrobia
OrderThermomicrobiales
FamilyThermomicrobiaceae
GenusThermomicrobium
SpeciesThermomicrobium roseum
StrainDSM 5159 DSM5159

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Thermomicrobium roseum DSM 5159 str. DSM5159
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature70
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermomicrobium roseum DSM 5159, complete sequence.

Gene Summary

Adenine Count

363451 bp

Thymine Count

364699 bp

Guanine Count

638868 bp

Cytosine Count

635986 bp

Genome Length

2003006 bp

Protein-coding Genes

1765 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
single-stranded-dna-specific exonuclease recjTRD_RS05565O32044Negative1181856 - 118354162128.9
metal-dependent transcriptional regulatorTRD_RS05570P0A673Negative1183641 - 118435727235.6
metallophosphoesteraseTRD_RS13610Not AvailablePositive1184448 - 118540735907.3
duf1786 domain-containing proteinTRD_RS05580Not AvailablePositive1185404 - 118648938958.2
polyprenyl synthetase family proteinTRD_RS05585P0A5H9Negative1186486 - 118752637744.4
zinc metallopeptidaseTRD_RS05590O05248Positive1187684 - 118837625208.3
clbs/dfsb family four-helix bundle proteinTRD_RS05595Not AvailablePositive1188543 - 118900718568.0
atp-dependent clp protease atp-binding subunit clpxTRD_RS05600Q8RC24Negative1189096 - 119036146635.3
atp-dependent clp protease proteolytic subunitTRD_RS05605B5YI38Negative1190394 - 119101122902.8
trigger factorTRD_RS05610B9L1E4Negative1191032 - 119250455329.8

Displaying genes 1091 – 1100 of 2625 in total

Metabolites

367 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da

Displaying 1–10 of 367 metabolites

Health Effects

No health effects information available for this bacterium.