Virgibacillus dokdonensis str. AK90

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Virgibacillus

Description

Virgibacillus dokdonensis str. AK90 is a rod-shaped, spore-forming bacterium that exhibits Gram-positive characteristics. This microorganism is notably adapted to thrive at an optimal temperature of 37.0°C, suggesting a preference for mesophilic conditions commonly found in various environments. The ability to form spores may confer resilience to adverse environmental conditions, allowing the strain to survive in fluctuating habitats. The Gram-positive nature of Virgibacillus dokdonensis str. AK90 indicates a thicker peptidoglycan layer in its cell wall, which is a characteristic feature of this group of bacteria. This structural trait is often associated with increased resistance to certain antibiotics and environmental stressors, although the specific implications for this strain remain to be elucidated. Given its rod shape and spore-forming capability, Virgibacillus dokdonensis str. AK90 may play a role in soil health and nutrient cycling, as many members of the Virgibacillus genus are known to contribute to microbial communities that promote plant growth and soil fertility. Further research may reveal additional ecological roles or biotechnological applications, particularly in the context of its environmental resilience and metabolic capabilities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusVirgibacillus
SpeciesVirgibacillus dokdonensis
StrainAK90

Profile

Physiology
Gram staining propertiesGram-negative / gram-positive
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Virgibacillus dokdonensis str. AK90
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Virgibacillus dokdonensis strain AK90

Gene Summary

Adenine Count

1365983 bp

Thymine Count

1355810 bp

Guanine Count

794109 bp

Cytosine Count

773693 bp

Genome Length

4289595 bp

Protein-coding Genes

3712 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
co-chaperone groesCAI16_18440Not AvailableNegative3912982 - 391326610173.2
cpbp family intramembrane metalloproteaseCAI16_18445Not AvailablePositive3914098 - 391480226014.9
duf4305 domain-containing proteinCAI16_18450Not AvailablePositive3914934 - 39151347447.49
redox-sensing transcriptional repressor rexCAI16_18455Not AvailableNegative3915547 - 391620925010.0
multidrug abc transporter atp-binding proteinCAI16_18460Not AvailablePositive3916556 - 391848474625.1
cell division proteinCAI16_18465Not AvailableNegative3918730 - 391990243549.2
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadCAI16_18470Not AvailableNegative3920105 - 392111536173.5
ribosomal-protein-alanine n-acetyltransferaseCAI16_18475Not AvailableNegative3921108 - 392156317725.6
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabCAI16_18480Not AvailableNegative3921571 - 392226625599.3
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeCAI16_18485Not AvailableNegative3922291 - 392274016989.1

Displaying genes 3511 – 3520 of 3891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.