Methanothrix harundinacea

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanotrichales

Family

Methanotrichaceae

Genus

Methanothrix

Description

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanotrichales
FamilyMethanotrichaceae
GenusMethanothrix
SpeciesMethanothrix harundinacea
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Methanothrix harundinacea isolate 56_747 MPJ_scaffold_18884,

Gene Summary

Adenine Count

493449 bp

Thymine Count

485011 bp

Guanine Count

639969 bp

Cytosine Count

640657 bp

Genome Length

2259086 bp

Protein-coding Genes

2265 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron transport protein, putativeXE07_2096P73182Negative2097802 - 209950260977.2
uncharacterized proteinXE07_2097Not AvailablePositive2099726 - 210057131621.5
nucleoside recognition domain proteinXE07_2098Q58951Negative2100591 - 210159536021.4
3-dehydroquinate synthaseXE07_2099A0B6K6Positive2101753 - 210285939848.9
3-dehydroquinate dehydrataseXE07_2100A0B6K7Positive2102913 - 210363225570.2
acetyl-coa decarbonylase/synthase complex subunit alphaXE07_2101Not AvailablePositive2104035 - 210558757573.5
uncharacterized proteinXE07_2102Not AvailablePositive2105987 - 210678728814.2
uncharacterized proteinXE07_2103Not AvailablePositive2106896 - 210767828101.6
cobalamin (vitamin b12) biosynthesis cbim proteinXE07_2104P44274Positive2107700 - 210832921918.8
uncharacterized proteinXE07_2105Not AvailablePositive2108331 - 210873814887.9

Displaying genes 2131 – 2140 of 4783 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

147 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000515mycothioneC34H58N4O24S2Chemical structure of mycothioneNot available
Average970.96Da
Monoisotopic970.2882411Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da

Displaying 1–10 of 147 metabolites

Health Effects

No health effects information available for this bacterium.