Shigella dysenteriae Sd197

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella dysenteriae Sd197 is a gram-negative, rod-shaped bacterium that belongs to the Enterobacteriaceae family. As a mesophilic organism, it thrives optimally at temperatures around 37°C. This microbe is classified as a chemoheterotroph, relying on organic compounds for energy and carbon, and is a facultative anaerobe, which means it can survive in both the presence and absence of oxygen.In terms of habitat, *Shigella dysenteriae* can primarily be found in the gastrointestinal tract of humans and other primates. It is known to inhabit the intestines, where it becomes pathogenic, causing bacillary dysentery. Transmission often occurs through contaminated food or water, emphasizing its significant role in public health concerns, especially in areas with poor sanitation.The pathogenicity of *S. dysenteriae* is largely attributed to its ability to invade the epithelial cells of the colon, leading to cell destruction and inflammatory responses. The bacterium produces a potent Shiga toxin, which can result in severe diarrhea, abdominal cramps, and even life-threatening complications, such as hemolytic uremic syndrome (HUS). Furthermore, *Shigella dysenteriae* exhibits notable resistance to many antibiotics, complicating treatment options for infections. This resistance often stems from the acquisition of plasmids carrying resistance genes, reflecting a growing concern for public health as it raises the stakes in controlling dysenteric outbreaks globally. Understanding the biology and pathogenic mechanisms of *S. dysenteriae Sd197* is crucial for developing effective prevention and therapeutic strategies against shigellosis, a disease that continues to impact vulnerable populations around the world.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella dysenteriae
StrainSd197

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella dysenteriae Sd197
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityYes

Genome Summary

Shigella dysenteriae Sd197, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4343 genes

Non-Coding Genes

327 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ycjf family proteinSDY_RS06850Not AvailablePositive1292764 - 129379838355.3
transcriptional regulator tyrrSDY_RS06855Not AvailablePositive1293973 - 129551457689.6
thiol peroxidaseSDY_RS06860Not AvailableNegative1295558 - 129606417836.3
l-ala-d/l-glu epimeraseSDY_RS06865Not AvailablePositive1296183 - 129714834747.1
murein tripeptide amidase mpaaSDY_RS06870Not AvailableNegative1297123 - 129785126584.4
cell envelope integrity protein credSDY_RS24355Not AvailableNegative1298142 - 12982885276.36
is1-like element is1n family transposaseSDY_RS06875Not AvailableNegative1298299 - 129899326698.3
cell envelope integrity protein credSDY_RS06880Not AvailablePositive1299051 - 129934711121.2
is1-like element is1n family transposaseSDY_RS06885Not AvailablePositive1299405 - 130009926698.3
dna-binding transcriptional regulator pgrrSDY_RS06890Not AvailablePositive1300229 - 130112833555.9

Displaying genes 1561 – 1570 of 4884 in total

Metabolites

2055 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 2055 metabolites

Health Effects

No health effects information available for this bacterium.