Methylobacterium variabile str. DSM 16961

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

Methylobacterium variabile str. DSM 16961 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and has an optimal growth temperature of 29.0°C. As a member of the Methylobacterium genus, this strain is characterized by its non-spore-forming nature, indicating a reliance on favorable environmental conditions for survival and proliferation. The aerobic metabolism of Methylobacterium variabile suggests that it plays a role in the cycling of methylated compounds in various environments, potentially contributing to carbon and nitrogen cycling processes. Its association with methylotrophic pathways, which allow it to utilize one-carbon compounds, may facilitate its adaptation to diverse ecological niches, including soil and plant environments. Given its specific temperature preference and aerobic requirements, Methylobacterium variabile str. DSM 16961 may exhibit an ecological significance in environments that are moderately warm and oxygen-rich, where it can compete effectively with other microbial populations. Further studies could elucidate its role in such ecosystems and its potential contributions to biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium variabile
StrainDSM 16961

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylobacterium variabile str. DSM 16961
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylobacterium variabile strain DSM 16961 contig_562, whole

Gene Summary

Adenine Count

1090546 bp

Thymine Count

1084001 bp

Guanine Count

2631927 bp

Cytosine Count

2627118 bp

Genome Length

7433592 bp

Protein-coding Genes

6415 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseVQ02_05855Not AvailableNegative1266639 - 126789243989.3
preprotein translocase subunit secaVQ02_05860Not AvailablePositive1268135 - 1271005107053.0
hypothetical proteinVQ02_05865Not AvailableNegative1271087 - 127153316637.4
gcn5 family acetyltransferaseVQ02_05870Not AvailableNegative1271719 - 127224018611.1
glucan biosynthesis protein gVQ02_05875Not AvailableNegative1272213 - 127383259573.5
ornithine decarboxylaseVQ02_05880Not AvailablePositive1274527 - 127569342111.5
gcn5 family acetyltransferaseVQ02_05885Not AvailablePositive1275878 - 127641418887.1
tetr family transcriptional regulatorVQ02_05890Not AvailableNegative1276474 - 127711523578.2
phenylacetate--coa ligaseVQ02_05895Not AvailableNegative1277143 - 127847749291.3
phenylacetic acid degradation protein paadVQ02_05900Not AvailableNegative1278721 - 127916715817.7

Displaying genes 1131 – 1140 of 6506 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.