Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium profundum |
| Strain | SS9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
72 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system accessory protein tagj | PBPR_RS03400 | Not Available | Positive | 736388 - 737182 | 29542.2 |
| type vi secretion system baseplate subunit tsse | PBPR_RS03405 | Not Available | Positive | 737205 - 737672 | 17753.2 |
| type vi secretion system baseplate subunit tssf | PBPR_RS03410 | Not Available | Positive | 737674 - 739503 | 69046.9 |
| type vi secretion system baseplate subunit tssg | PBPR_RS03415 | Not Available | Positive | 739503 - 740471 | 36448.7 |
| type vi secretion system atpase tssh | PBPR_RS03420 | Not Available | Positive | 740492 - 743080 | 94805.8 |
| hcp family type vi secretion system effector | PBPR_RS03425 | Not Available | Positive | 743312 - 743791 | 17782.9 |
| type vi secretion system tip protein vgrg | PBPR_RS03430 | Not Available | Positive | 743850 - 745700 | 68360.2 |
| paar domain-containing protein | PBPR_RS03435 | Not Available | Positive | 745739 - 746029 | 9327.27 |
| hypothetical protein | PBPR_RS03440 | Not Available | Positive | 746036 - 747007 | 36031.1 |
| rhs repeat-associated core domain-containing protein | PBPR_RS03445 | Not Available | Positive | 746998 - 751056 | 153934.0 |
Pathways
1310 pathways
Health Effects
No health effects information available for this bacterium.

