Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_101980 | Not Available | Negative | 1080220 - 1080897 | 26199.3 |
| hypothetical protein | SAMN05421639_101981 | Not Available | Negative | 1080901 - 1082307 | 54763.4 |
| aaa domain-containing protein | SAMN05421639_101982 | Not Available | Negative | 1082377 - 1083453 | 41120.2 |
| hypothetical protein | SAMN05421639_101983 | Not Available | Negative | 1083453 - 1083749 | 11277.5 |
| dna binding domain-containing protein, excisionase family | SAMN05421639_101984 | Not Available | Negative | 1083749 - 1084093 | 13002.9 |
| hypothetical protein | SAMN05421639_101985 | Not Available | Negative | 1084178 - 1084882 | 27946.2 |
| site-specific recombinase xerd | SAMN05421639_101986 | Not Available | Negative | 1084892 - 1086046 | 44849.8 |
| dna binding domain-containing protein, excisionase family | SAMN05421639_101987 | Not Available | Negative | 1086069 - 1086617 | 21115.1 |
| trna modification gtpase | SAMN05421639_101988 | Not Available | Negative | 1086862 - 1088247 | 50960.7 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN05421639_101989 | Not Available | Negative | 1088529 - 1089107 | 22324.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
