Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ergothioneine biosynthesis protein egtb | SAMN05421639_101930 | Not Available | Negative | 1010172 - 1011344 | 45728.6 |
| dimethylhistidine n-methyltransferase | SAMN05421639_101931 | Not Available | Negative | 1011685 - 1012668 | 37367.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421639_101932 | Not Available | Positive | 1012970 - 1013971 | 37949.9 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN05421639_101933 | Not Available | Negative | 1014081 - 1014602 | 19632.3 |
| ca2+:h+ antiporter | SAMN05421639_101934 | Not Available | Negative | 1014752 - 1015894 | 41104.1 |
| hypothetical protein | SAMN05421639_101935 | Not Available | Positive | 1016584 - 1016784 | 7628.19 |
| hypothetical protein | SAMN05421639_101936 | Not Available | Negative | 1016946 - 1017215 | 10428.3 |
| arac-type dna-binding protein | SAMN05421639_101937 | Not Available | Negative | 1017541 - 1018101 | 21750.6 |
| hypothetical protein | SAMN05421639_101938 | Not Available | Positive | 1018410 - 1018850 | 17165.3 |
| acyltransferase | SAMN05421639_101939 | Not Available | Negative | 1018923 - 1020059 | 43643.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
