Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05421639_101870 | Not Available | Negative | 934178 - 935095 | 36514.6 |
| predicted phosphoesterase | SAMN05421639_101871 | Not Available | Negative | 935185 - 935979 | 30588.6 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05421639_101872 | Not Available | Negative | 936157 - 937545 | 49885.7 |
| transcriptional regulator, asnc family | SAMN05421639_101873 | Not Available | Positive | 937689 - 938159 | 17910.1 |
| trans-aconitate 2-methyltransferase | SAMN05421639_101874 | Not Available | Positive | 938453 - 939220 | 29266.9 |
| hypothetical protein | SAMN05421639_101875 | Not Available | Negative | 939275 - 939763 | 17252.3 |
| hypothetical protein | SAMN05421639_101876 | Not Available | Negative | 939810 - 940862 | 37145.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421639_101877 | Not Available | Positive | 941454 - 942632 | 40747.6 |
| hypothetical protein | SAMN05421639_101878 | Not Available | Negative | 942732 - 943910 | 45944.0 |
| hypothetical protein | SAMN05421639_101879 | Not Available | Negative | 944103 - 944429 | 12588.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
