Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_101820 | Not Available | Positive | 877450 - 877818 | 14382.5 |
| hypothetical protein | SAMN05421639_101821 | Not Available | Negative | 877799 - 877936 | 5120.46 |
| hypothetical protein | SAMN05421639_101822 | Not Available | Positive | 878391 - 879302 | 35438.6 |
| hypothetical protein | SAMN05421639_101823 | Not Available | Negative | 879327 - 879830 | 20278.2 |
| transposase | SAMN05421639_101824 | Not Available | Negative | 879904 - 880875 | 37528.7 |
| ca-activated chloride channel family protein | SAMN05421639_101825 | Not Available | Negative | 881100 - 883580 | 91636.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421639_101826 | Not Available | Negative | 883592 - 884110 | 19910.9 |
| bleomycin hydrolase | SAMN05421639_101827 | Not Available | Positive | 884341 - 885543 | 44872.1 |
| hypothetical protein | SAMN05421639_101828 | Not Available | Positive | 885717 - 885878 | 5804.89 |
| 2,4-dienoyl-coa reductase | SAMN05421639_101829 | Not Available | Negative | 886277 - 887338 | 39344.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
