Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN05421639_101810 | Not Available | Positive | 868443 - 870860 | 87861.5 |
| alkaline and neutral invertase | SAMN05421639_101811 | Not Available | Positive | 870957 - 872078 | 43059.1 |
| uridine kinase | SAMN05421639_101812 | Not Available | Positive | 872149 - 872793 | 24864.7 |
| maltose/moltooligosaccharide transporter | SAMN05421639_101813 | Not Available | Positive | 872796 - 874187 | 51925.6 |
| hypothetical protein | SAMN05421639_101814 | Not Available | Negative | 874575 - 874817 | 9339.14 |
| hypothetical protein | SAMN05421639_101815 | Not Available | Positive | 874947 - 875120 | 6566.35 |
| stas domain-containing protein | SAMN05421639_101816 | Not Available | Positive | 875420 - 876445 | 39872.3 |
| protein of unknown function | SAMN05421639_101817 | Not Available | Positive | 876448 - 876807 | 14093.7 |
| hypothetical protein | SAMN05421639_101818 | Not Available | Positive | 876804 - 877328 | 20706.2 |
| hypothetical protein | SAMN05421639_101819 | Not Available | Negative | 877294 - 877398 | 4066.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
