Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function, duf393 | SAMN05421639_101800 | Not Available | Negative | 856836 - 857648 | 31316.9 |
| hypothetical protein | SAMN05421639_101801 | Not Available | Negative | 857661 - 858050 | 15208.0 |
| hypothetical protein | SAMN05421639_101802 | Not Available | Negative | 858132 - 858533 | 15246.2 |
| hypothetical protein | SAMN05421639_101803 | Not Available | Negative | 858541 - 858885 | 13327.8 |
| dna-binding transcriptional regulator gbsr, marr family | SAMN05421639_101804 | Not Available | Negative | 858954 - 859457 | 19440.5 |
| aldehyde dehydrogenase (nad+) | SAMN05421639_101805 | Not Available | Positive | 859835 - 861154 | 49108.7 |
| cytochrome c peroxidase | SAMN05421639_101806 | Not Available | Negative | 861256 - 862419 | 43720.9 |
| starch-binding associating with outer membrane | SAMN05421639_101807 | Not Available | Negative | 862621 - 864033 | 52317.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421639_101808 | Not Available | Negative | 864045 - 866837 | 104524.0 |
| laci family transcriptional regulator | SAMN05421639_101809 | Not Available | Negative | 867230 - 868216 | 37297.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
