Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN05421639_101760 | Not Available | Negative | 805598 - 812791 | 252137.0 |
| hypothetical protein | SAMN05421639_101761 | Not Available | Negative | 812811 - 813986 | 41451.7 |
| hypothetical protein | SAMN05421639_101762 | Not Available | Negative | 814401 - 814502 | 3966.08 |
| hypothetical protein | SAMN05421639_101763 | Not Available | Negative | 816033 - 816563 | 21129.9 |
| helix-turn-helix | SAMN05421639_101764 | Not Available | Positive | 817237 - 817545 | 12133.8 |
| hypothetical protein | SAMN05421639_101765 | Not Available | Positive | 818103 - 818195 | 3485.12 |
| hypothetical protein | SAMN05421639_101766 | Not Available | Positive | 818176 - 818388 | 7827.49 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421639_101767 | Not Available | Positive | 818480 - 818932 | 17382.9 |
| hypothetical protein | SAMN05421639_101768 | Not Available | Positive | 819103 - 819567 | 17266.0 |
| hypothetical protein | SAMN05421639_101769 | Not Available | Negative | 819660 - 820112 | 17401.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
