Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_101750 | Not Available | Negative | 795489 - 796172 | 26253.9 |
| hypothetical protein | SAMN05421639_101751 | Not Available | Negative | 796181 - 797125 | 36924.9 |
| hypothetical protein | SAMN05421639_101752 | Not Available | Positive | 797688 - 797852 | 6190.52 |
| hypothetical protein | SAMN05421639_101753 | Not Available | Negative | 798196 - 798432 | 9549.16 |
| hypothetical protein | SAMN05421639_101754 | Not Available | Negative | 798480 - 799163 | 27019.3 |
| hypothetical protein | SAMN05421639_101755 | Not Available | Negative | 799220 - 799768 | 21444.9 |
| hypothetical protein | SAMN05421639_101756 | Not Available | Negative | 799845 - 800492 | 25873.8 |
| hypothetical protein | SAMN05421639_101757 | Not Available | Negative | 800858 - 801256 | 15370.1 |
| hypothetical protein | SAMN05421639_101758 | Not Available | Negative | 801314 - 801724 | 14764.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421639_101759 | Not Available | Negative | 801866 - 805444 | 126579.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
