Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_101740 | Not Available | Positive | 785387 - 785992 | 23269.9 |
| hypothetical protein | SAMN05421639_101741 | Not Available | Positive | 786078 - 786596 | 20024.3 |
| hypothetical protein | SAMN05421639_101742 | Not Available | Positive | 786705 - 788207 | 58190.7 |
| hypothetical protein | SAMN05421639_101743 | Not Available | Positive | 788192 - 788803 | 23715.4 |
| hypothetical protein | SAMN05421639_101744 | Not Available | Positive | 788897 - 789370 | 17903.7 |
| hypothetical protein | SAMN05421639_101745 | Not Available | Positive | 789421 - 790290 | 35144.8 |
| hypothetical protein | SAMN05421639_101746 | Not Available | Positive | 790410 - 791999 | 59580.1 |
| hypothetical protein | SAMN05421639_101747 | Not Available | Positive | 791992 - 792978 | 38134.5 |
| hypothetical protein | SAMN05421639_101748 | Not Available | Negative | 793689 - 794213 | 20834.4 |
| helix-turn-helix | SAMN05421639_101749 | Not Available | Positive | 795009 - 795260 | 9868.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
