Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, sss family | SAMN05421639_101720 | Not Available | Negative | 758630 - 760321 | 62689.0 |
| hypothetical protein | SAMN05421639_101721 | Not Available | Negative | 760318 - 760422 | 4197.1 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN05421639_101722 | Not Available | Negative | 760422 - 762926 | 92599.5 |
| hypothetical protein | SAMN05421639_101723 | Not Available | Positive | 763666 - 764880 | 42650.8 |
| alkaline d-peptidase. serine peptidase. merops family s12 | SAMN05421639_101724 | Not Available | Negative | 765136 - 766254 | 40234.3 |
| hypothetical protein | SAMN05421639_101725 | Not Available | Positive | 766300 - 766434 | 5124.49 |
| hypothetical protein | SAMN05421639_101726 | Not Available | Negative | 766521 - 767066 | 21424.4 |
| hypothetical protein | SAMN05421639_101727 | Not Available | Positive | 767159 - 767380 | 8628.57 |
| sir2-like domain-containing protein | SAMN05421639_101728 | Not Available | Positive | 767795 - 769129 | 51912.1 |
| transcriptional regulator, arac family | SAMN05421639_101729 | Not Available | Positive | 769365 - 770489 | 43988.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
