Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_101710 | Not Available | Negative | 751091 - 751444 | 12160.1 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421639_101711 | Not Available | Positive | 752064 - 753524 | 54001.3 |
| hypothetical protein | SAMN05421639_101712 | Not Available | Positive | 753934 - 754092 | 6135.46 |
| hypothetical protein | SAMN05421639_101713 | Not Available | Positive | 754567 - 755085 | 20352.8 |
| hypothetical protein | SAMN05421639_101714 | Not Available | Positive | 755134 - 755313 | 6846.47 |
| hypothetical protein | SAMN05421639_101715 | Not Available | Negative | 755290 - 755514 | 8537.15 |
| hypothetical protein | SAMN05421639_101716 | Not Available | Negative | 755561 - 755938 | 14942.2 |
| isxo2-like transposase domain-containing protein | SAMN05421639_101717 | Not Available | Negative | 755911 - 756837 | 36315.2 |
| aspartyl protease | SAMN05421639_101718 | Not Available | Positive | 756959 - 757843 | 33426.6 |
| protein of unknown function | SAMN05421639_101719 | Not Available | Negative | 758076 - 758594 | 18845.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
