Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_101690 | Not Available | Positive | 727749 - 728045 | 11820.4 |
| site-specific recombinase | SAMN05421639_101691 | Not Available | Negative | 728367 - 730397 | 77513.0 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN05421639_101692 | Not Available | Negative | 730411 - 731055 | 24802.2 |
| iron complex transport system substrate-binding protein | SAMN05421639_101693 | Not Available | Negative | 731101 - 732147 | 39797.8 |
| Trna-arg | Not Available | Not Available | Positive | 732207 - 732280 | Not Available |
| hypothetical protein | SAMN05421639_101695 | Not Available | Negative | 732479 - 732634 | 5909.4 |
| recombinase | SAMN05421639_101696 | Not Available | Negative | 732621 - 733610 | 38341.8 |
| hypothetical protein | SAMN05421639_101697 | Not Available | Positive | 733710 - 735251 | 56359.8 |
| transcriptional regulator, arac family | SAMN05421639_101698 | Not Available | Negative | 735687 - 736478 | 30824.2 |
| dihydrodipicolinate reductase | SAMN05421639_101699 | Not Available | Positive | 736953 - 737756 | 29174.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
