Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN05421639_101670 | Not Available | Negative | 706224 - 706733 | 19703.6 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421639_101671 | Not Available | Negative | 706739 - 707164 | 16335.2 |
| sodium/proton antiporter, cpa1 family | SAMN05421639_101672 | Not Available | Negative | 707186 - 708799 | 59742.7 |
| putative membrane protein | SAMN05421639_101673 | Not Available | Negative | 708993 - 709997 | 38590.4 |
| protein of unknown function | SAMN05421639_101674 | Not Available | Negative | 710086 - 710763 | 26517.0 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN05421639_101675 | Not Available | Negative | 710886 - 711281 | 14664.4 |
| phnb protein | SAMN05421639_101676 | Not Available | Negative | 711441 - 711890 | 16555.3 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05421639_101677 | Not Available | Negative | 711931 - 712476 | 20284.6 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05421639_101678 | Not Available | Negative | 712481 - 712852 | 13862.4 |
| hypothetical protein | SAMN05421639_101679 | Not Available | Negative | 712849 - 713253 | 14308.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
