Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05421639_101660 | Not Available | Negative | 695878 - 697296 | 52118.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421639_101661 | Not Available | Negative | 697309 - 700128 | 104826.0 |
| protein of unknown function | SAMN05421639_101662 | Not Available | Positive | 700478 - 701149 | 23768.9 |
| hypothetical protein | SAMN05421639_101663 | Not Available | Positive | 701191 - 701496 | 11599.8 |
| arsenate reductase | SAMN05421639_101664 | Not Available | Negative | 701538 - 701888 | 13463.6 |
| deoxyadenosine/deoxycytidine kinase | SAMN05421639_101665 | Not Available | Negative | 701975 - 702589 | 23802.3 |
| hypothetical protein | SAMN05421639_101666 | Not Available | Negative | 702619 - 703584 | 37449.0 |
| glutamine cyclotransferase | SAMN05421639_101667 | Not Available | Negative | 703664 - 704704 | 38429.4 |
| glutamine cyclotransferase | SAMN05421639_101668 | Not Available | Negative | 704792 - 705814 | 37738.5 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05421639_101669 | Not Available | Negative | 705850 - 706227 | 14577.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
