Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wg containing repeat-containing protein | SAMN05421639_101650 | Not Available | Negative | 684231 - 685190 | 37429.3 |
| adenylosuccinate lyase | SAMN05421639_101651 | Not Available | Negative | 685236 - 686663 | 54082.0 |
| arac family transcriptional regulator, transcriptional activator of poba | SAMN05421639_101652 | Not Available | Positive | 686917 - 687798 | 34524.2 |
| hypothetical protein | SAMN05421639_101653 | Not Available | Positive | 687864 - 689030 | 41806.7 |
| bacteriocin-type signal sequence-containing protein | SAMN05421639_101654 | Not Available | Negative | 689517 - 689657 | 5065.46 |
| hypothetical protein | SAMN05421639_101655 | Not Available | Negative | 689864 - 690277 | 15295.8 |
| hypothetical protein | SAMN05421639_101656 | Not Available | Negative | 690475 - 690861 | 14067.2 |
| beta-glucosidase | SAMN05421639_101657 | Not Available | Negative | 690949 - 693276 | 84895.6 |
| phospholipase/carboxylesterase | SAMN05421639_101658 | Not Available | Negative | 693612 - 694319 | 26706.7 |
| hypothetical protein | SAMN05421639_101659 | Not Available | Negative | 694412 - 695803 | 53118.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
