Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| activator of hsp90 atpase homolog 1-like protein | SAMN05421639_101590 | Not Available | Negative | 628029 - 628472 | 16884.9 |
| hypothetical protein | SAMN05421639_101591 | Not Available | Negative | 628498 - 628926 | 16692.5 |
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN05421639_101592 | Not Available | Negative | 629255 - 630121 | 33102.2 |
| hypothetical protein | SAMN05421639_101593 | Not Available | Negative | 630212 - 630469 | 9676.89 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421639_101594 | Not Available | Negative | 630487 - 630900 | 16297.2 |
| phnb protein | SAMN05421639_101595 | Not Available | Negative | 630976 - 631407 | 16196.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421639_101596 | Not Available | Negative | 631651 - 632427 | 29366.4 |
| hypothetical protein | SAMN05421639_101597 | Not Available | Negative | 632429 - 632953 | 20359.6 |
| hypothetical protein | SAMN05421639_101598 | Not Available | Negative | 633062 - 633523 | 17568.0 |
| hypothetical protein | SAMN05421639_101599 | Not Available | Negative | 633751 - 634161 | 15744.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
