Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN05421639_101570 | Not Available | Negative | 607400 - 608125 | 27720.3 |
| histidine kinase | SAMN05421639_101571 | Not Available | Negative | 608122 - 609198 | 42383.0 |
| hypothetical protein | SAMN05421639_101572 | Not Available | Positive | 609396 - 609824 | 17275.7 |
| hypothetical protein | SAMN05421639_101573 | Not Available | Positive | 609829 - 610800 | 37145.6 |
| small multidrug resistance pump | SAMN05421639_101574 | Not Available | Negative | 610987 - 611322 | 12199.5 |
| hypothetical protein | SAMN05421639_101575 | Not Available | Negative | 612304 - 612447 | 5227.12 |
| atpase family associated with various cellular activities (aaa) | SAMN05421639_101576 | Not Available | Positive | 612497 - 613219 | 27356.9 |
| hypothetical protein | SAMN05421639_101577 | Not Available | Positive | 613216 - 613947 | 27576.6 |
| hypothetical protein | SAMN05421639_101578 | Not Available | Negative | 614209 - 614412 | 7807.87 |
| hypothetical protein | SAMN05421639_101579 | Not Available | Positive | 614584 - 615156 | 22070.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
