Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_101490 | Not Available | Positive | 503866 - 504084 | 8239.16 |
| bacteriocin-type signal sequence-containing protein | SAMN05421639_101491 | Not Available | Positive | 504269 - 504433 | 5901.45 |
| bacteriocin-type signal sequence-containing protein | SAMN05421639_101492 | Not Available | Positive | 504576 - 504758 | 6692.41 |
| bacteriocin-type signal sequence-containing protein | SAMN05421639_101493 | Not Available | Positive | 504807 - 505010 | 7359.1 |
| hypothetical protein | SAMN05421639_101494 | Not Available | Positive | 505065 - 505244 | 6799.4 |
| hypothetical protein | SAMN05421639_101495 | Not Available | Negative | 505361 - 506452 | 40614.8 |
| ferritin | SAMN05421639_101496 | Not Available | Negative | 506650 - 507201 | 20736.2 |
| hypothetical protein | SAMN05421639_101497 | Not Available | Positive | 507411 - 507578 | 5973.54 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN05421639_101498 | Not Available | Negative | 507732 - 509327 | 60441.7 |
| glpgli family protein | SAMN05421639_101499 | Not Available | Negative | 509499 - 510317 | 32122.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
