Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted transcriptional regulator | SAMN05421639_101460 | Not Available | Negative | 473710 - 474075 | 14356.5 |
| glutathione synthetase, atp-grasp domain | SAMN05421639_101461 | Not Available | Positive | 474526 - 475410 | 33945.1 |
| hypothetical protein | SAMN05421639_101462 | Not Available | Positive | 475693 - 476274 | 21908.4 |
| acetyltransferase (gnat) family protein | SAMN05421639_101463 | Not Available | Negative | 476777 - 477223 | 17525.8 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05421639_101464 | Not Available | Positive | 477313 - 478761 | 54243.8 |
| hypothetical protein | SAMN05421639_101465 | Not Available | Negative | 479127 - 479291 | 6254.52 |
| hypothetical protein | SAMN05421639_101466 | Not Available | Positive | 479590 - 480102 | 18491.2 |
| thioredoxin-like | SAMN05421639_101467 | Not Available | Positive | 480189 - 480773 | 22914.9 |
| Trna-met | Not Available | Not Available | Positive | 480881 - 480956 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 480993 - 481068 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
