Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp synthase-glutamine amidotransferase | SAMN05421639_101399 | Not Available | Positive | 406354 - 407187 | 32367.5 |
| hypothetical protein | SAMN05421639_101400 | Not Available | Positive | 407289 - 408473 | 46065.2 |
| hypothetical protein | SAMN05421639_101401 | Not Available | Positive | 408541 - 409035 | 19043.8 |
| cyanophycin synthetase | SAMN05421639_101402 | Not Available | Negative | 409191 - 411821 | 97453.5 |
| cyanophycinase | SAMN05421639_101403 | Not Available | Positive | 412020 - 412910 | 32458.9 |
| l-asparaginase | SAMN05421639_101404 | Not Available | Positive | 413192 - 414034 | 30052.3 |
| hypothetical protein | SAMN05421639_101405 | Not Available | Positive | 414131 - 414367 | 8507.01 |
| methyltransferase domain-containing protein | SAMN05421639_101406 | Not Available | Negative | 414460 - 415251 | 30351.0 |
| hypothetical protein | SAMN05421639_101407 | Not Available | Negative | 415286 - 415480 | 7345.84 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421639_101408 | Not Available | Negative | 415525 - 416169 | 24537.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
