Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| opacity protein | SAMN05421639_101358 | Not Available | Negative | 363751 - 364404 | 23712.4 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421639_101359 | Not Available | Negative | 364495 - 365103 | 21860.9 |
| hypothetical protein | SAMN05421639_101360 | Not Available | Negative | 365467 - 366141 | 25254.1 |
| hypothetical protein | SAMN05421639_101361 | Not Available | Negative | 366301 - 366798 | 17859.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421639_101362 | Not Available | Negative | 366924 - 367577 | 22745.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421639_101363 | Not Available | Negative | 367688 - 368359 | 25039.3 |
| phosphate starvation-inducible protein phoh | SAMN05421639_101364 | Not Available | Negative | 368467 - 369423 | 36200.3 |
| putative membrane protein | SAMN05421639_101365 | Not Available | Positive | 369602 - 370102 | 19345.5 |
| hypothetical protein | SAMN05421639_101366 | Not Available | Positive | 370286 - 371113 | 30870.8 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | SAMN05421639_101367 | Not Available | Positive | 371177 - 372490 | 47336.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
