Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_101328 | Not Available | Negative | 335795 - 336211 | 15938.2 |
| hypothetical protein | SAMN05421639_101329 | Not Available | Negative | 336208 - 336693 | 18478.3 |
| hypothetical protein | SAMN05421639_101330 | Not Available | Negative | 336762 - 337859 | 41839.2 |
| hypothetical protein | SAMN05421639_101331 | Not Available | Negative | 337941 - 338630 | 26541.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421639_101332 | Not Available | Negative | 338596 - 339150 | 21931.1 |
| mfs transporter, nhs family, xanthosine permease | SAMN05421639_101333 | Not Available | Negative | 339267 - 340649 | 51533.6 |
| hypothetical protein | SAMN05421639_101334 | Not Available | Negative | 340672 - 341271 | 22615.9 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN05421639_101335 | Not Available | Negative | 341441 - 342388 | 33071.2 |
| electron transfer flavoprotein beta subunit | SAMN05421639_101336 | Not Available | Negative | 342431 - 343177 | 26297.7 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421639_101337 | Not Available | Negative | 343329 - 344036 | 25775.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
