Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05421639_101298 | Not Available | Negative | 303352 - 304038 | 25369.4 |
| hypothetical protein | SAMN05421639_101299 | Not Available | Negative | 304056 - 304286 | 8575.13 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421639_101300 | Not Available | Negative | 304354 - 304800 | 17044.3 |
| 1,4-dihydroxy-2-naphthoate prenyltransferase | SAMN05421639_101301 | Not Available | Negative | 304811 - 305740 | 34726.9 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | SAMN05421639_101302 | Not Available | Negative | 305831 - 306667 | 30893.7 |
| hypothetical protein | SAMN05421639_101303 | Not Available | Negative | 306827 - 307852 | 37914.2 |
| dna gyrase subunit a | SAMN05421639_101304 | Not Available | Negative | 307881 - 310469 | 96551.2 |
| protein of unknown function | SAMN05421639_101305 | Not Available | Positive | 310618 - 310932 | 12463.9 |
| hypothetical protein | SAMN05421639_101306 | Not Available | Negative | 310977 - 311210 | 8847.77 |
| phosphinothricin acetyltransferase | SAMN05421639_101307 | Not Available | Negative | 311322 - 311816 | 19019.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
