Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_101237 | Not Available | Negative | 244160 - 244753 | 23605.9 |
| hypothetical protein | SAMN05421639_101238 | Not Available | Negative | 244777 - 245310 | 21119.5 |
| threonine/homoserine efflux transporter rhta | SAMN05421639_101239 | Not Available | Positive | 245578 - 246447 | 32364.1 |
| transcriptional regulator, arac family | SAMN05421639_101240 | Not Available | Positive | 246610 - 247422 | 30955.2 |
| hypothetical protein | SAMN05421639_101241 | Not Available | Positive | 247495 - 247968 | 18348.4 |
| toxic protein syme | SAMN05421639_101242 | Not Available | Negative | 248518 - 248745 | 8875.78 |
| helix-turn-helix domain-containing protein | SAMN05421639_101243 | Not Available | Positive | 248896 - 249306 | 15882.2 |
| hypothetical protein | SAMN05421639_101244 | Not Available | Positive | 249618 - 250073 | 17013.4 |
| transcriptional regulator, arsr family | SAMN05421639_101245 | Not Available | Positive | 250201 - 250524 | 12374.0 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421639_101246 | Not Available | Positive | 250638 - 251102 | 18043.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
