Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-4 | SAMN05421639_101217 | Not Available | Positive | 221681 - 222826 | 43033.2 |
| dna polymerase iii, alpha subunit | SAMN05421639_101218 | Not Available | Positive | 222848 - 225901 | 117484.0 |
| asma protein | SAMN05421639_101219 | Not Available | Negative | 225934 - 228825 | 108186.0 |
| hypothetical protein | SAMN05421639_101220 | Not Available | Positive | 229053 - 229352 | 10623.2 |
| methionine aminopeptidase, type i | SAMN05421639_101221 | Not Available | Negative | 229444 - 230208 | 28182.7 |
| transcriptional regulator, arsr family | SAMN05421639_101222 | Not Available | Positive | 230375 - 230701 | 11851.5 |
| hypothetical protein | SAMN05421639_101223 | Not Available | Positive | 230760 - 231221 | 17056.2 |
| arsenate reductase | SAMN05421639_101224 | Not Available | Positive | 231246 - 231863 | 23542.1 |
| arsenite transporter, acr3 family | SAMN05421639_101225 | Not Available | Positive | 231880 - 232911 | 38629.2 |
| hypothetical protein | SAMN05421639_101226 | Not Available | Positive | 233244 - 233528 | 9055.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
