Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase (glutamine-hydrolysing) | SAMN05421639_102768 | Not Available | Positive | 2062655 - 2064349 | 64113.3 |
| hypothetical protein | SAMN05421639_102769 | Not Available | Positive | 2064592 - 2065404 | 32295.7 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05421639_102770 | Not Available | Positive | 2065544 - 2066947 | 51670.6 |
| hypothetical protein | SAMN05421639_102771 | Not Available | Positive | 2067052 - 2067927 | 32084.1 |
| hypothetical protein | SAMN05421639_102772 | Not Available | Positive | 2068162 - 2068473 | 11829.3 |
| hypothetical protein | SAMN05421639_102773 | Not Available | Positive | 2068531 - 2069430 | 33818.3 |
| nad(p)h-dependent fmn reductase | SAMN05421639_102774 | Not Available | Positive | 2069454 - 2069993 | 20330.2 |
| uncharacterized membrane protein | SAMN05421639_102775 | Not Available | Positive | 2069986 - 2070564 | 21997.4 |
| uncharacterized fe-s cluster protein yjdi | SAMN05421639_102776 | Not Available | Positive | 2070566 - 2070784 | 8283.89 |
| putative redox protein | SAMN05421639_102777 | Not Available | Positive | 2070784 - 2071179 | 14788.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
