Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate ammonia-lyase | SAMN05421639_102617 | Not Available | Negative | 1895594 - 1896994 | 50846.4 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421639_102618 | Not Available | Negative | 1897064 - 1898089 | 38589.6 |
| Trna-ser | Not Available | Not Available | Positive | 1898225 - 1898312 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1898341 - 1898415 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1898448 - 1898521 | Not Available |
| hypothetical protein | SAMN05421639_102622 | Not Available | Positive | 1898897 - 1899091 | 7412.95 |
| hypothetical protein | SAMN05421639_102623 | Not Available | Negative | 1899208 - 1899591 | 14781.8 |
| rhs repeat-associated core domain-containing protein | SAMN05421639_102624 | Not Available | Negative | 1899598 - 1906029 | 236489.0 |
| hypothetical protein | SAMN05421639_102625 | Not Available | Negative | 1906054 - 1906539 | 18628.9 |
| Trna-pro | Not Available | Not Available | Positive | 1907078 - 1907152 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
