Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_102537 | Not Available | Negative | 1824297 - 1824656 | 14124.3 |
| hypothetical protein | SAMN05421639_102538 | Not Available | Positive | 1825070 - 1825609 | 20533.9 |
| hypothetical protein | SAMN05421639_102539 | Not Available | Negative | 1825589 - 1825801 | 8362.47 |
| hypothetical protein | SAMN05421639_102540 | Not Available | Positive | 1825840 - 1826397 | 21216.6 |
| prtrc system thif family protein | SAMN05421639_102541 | Not Available | Negative | 1826548 - 1827351 | 29808.5 |
| prtrc system protein b | SAMN05421639_102542 | Not Available | Negative | 1827348 - 1828070 | 27572.1 |
| hypothetical protein | SAMN05421639_102543 | Not Available | Negative | 1828080 - 1829234 | 45199.7 |
| prtrc system protein c | SAMN05421639_102544 | Not Available | Negative | 1829312 - 1829530 | 8147.89 |
| prtrc system protein e | SAMN05421639_102545 | Not Available | Negative | 1829548 - 1830099 | 20995.9 |
| hypothetical protein | SAMN05421639_102546 | Not Available | Negative | 1830133 - 1830564 | 17363.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
