Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_102527 | Not Available | Negative | 1815234 - 1815560 | 12395.0 |
| transcriptional regulator, arsr family | SAMN05421639_102528 | Not Available | Positive | 1815696 - 1816022 | 11809.5 |
| hypothetical protein | SAMN05421639_102529 | Not Available | Positive | 1816013 - 1816552 | 20367.6 |
| phosphinothricin acetyltransferase | SAMN05421639_102530 | Not Available | Positive | 1816562 - 1817053 | 18478.1 |
| phosphoesterase, mj0936 family | SAMN05421639_102531 | Not Available | Positive | 1817080 - 1817853 | 29377.7 |
| glycine cleavage system h protein | SAMN05421639_102532 | Not Available | Positive | 1817870 - 1818247 | 14337.0 |
| arsenite transporter, acr3 family | SAMN05421639_102533 | Not Available | Positive | 1818251 - 1819282 | 38606.2 |
| hypothetical protein | SAMN05421639_102534 | Not Available | Positive | 1819822 - 1820217 | 14617.3 |
| hypothetical protein | SAMN05421639_102535 | Not Available | Positive | 1820207 - 1823620 | 133846.0 |
| hypothetical protein | SAMN05421639_102536 | Not Available | Negative | 1823815 - 1824237 | 16363.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
