Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421639_102517 | Not Available | Negative | 1801730 - 1802050 | 11613.5 |
| hypothetical protein | SAMN05421639_102518 | Not Available | Negative | 1802171 - 1802758 | 22891.7 |
| chromosome partitioning protein | SAMN05421639_102519 | Not Available | Negative | 1802794 - 1803477 | 26177.3 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN05421639_102520 | Not Available | Negative | 1803547 - 1805025 | 57568.6 |
| mobilisation protein (mobc) | SAMN05421639_102521 | Not Available | Negative | 1805037 - 1805396 | 13845.9 |
| hypothetical protein | SAMN05421639_102522 | Not Available | Negative | 1805458 - 1805781 | 11999.0 |
| hypothetical protein | SAMN05421639_102523 | Not Available | Negative | 1805854 - 1806945 | 38235.9 |
| cd2+/zn2+-exporting atpase | SAMN05421639_102524 | Not Available | Negative | 1807403 - 1809454 | 74395.4 |
| rnd family efflux transporter, mfp subunit | SAMN05421639_102525 | Not Available | Negative | 1809472 - 1810728 | 45877.5 |
| cobalt-zinc-cadmium resistance protein czca | SAMN05421639_102526 | Not Available | Negative | 1810730 - 1815094 | 161215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
