Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421639_102447 | Not Available | Negative | 1714973 - 1715743 | 29179.8 |
| enoyl-[acyl-carrier protein] reductase ii | SAMN05421639_102448 | Not Available | Negative | 1715759 - 1716703 | 34063.2 |
| hypothetical protein | SAMN05421639_102449 | Not Available | Negative | 1716814 - 1717317 | 19465.4 |
| periplasmic chaperone for outer membrane proteins sura | SAMN05421639_102450 | Not Available | Negative | 1717410 - 1718774 | 51566.0 |
| sugar or nucleoside kinase, ribokinase family | SAMN05421639_102451 | Not Available | Negative | 1718862 - 1719785 | 33981.9 |
| protein involved in gliding motility gldd | SAMN05421639_102452 | Not Available | Negative | 1719813 - 1720370 | 21904.1 |
| a/g-specific dna-adenine glycosylase | SAMN05421639_102453 | Not Available | Negative | 1720415 - 1721452 | 40068.7 |
| hypothetical protein | SAMN05421639_102454 | Not Available | Negative | 1721602 - 1722111 | 19724.2 |
| hypothetical protein | SAMN05421639_102455 | Not Available | Negative | 1722140 - 1723501 | 51487.1 |
| type vi secretion system, vipa, vc_a0107 or hcp2 | SAMN05421639_102456 | Not Available | Negative | 1723523 - 1724083 | 21595.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
