Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin-5'-phosphate synthase | SAMN05421639_102387 | Not Available | Negative | 1654324 - 1655106 | 29060.4 |
| nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase | SAMN05421639_102388 | Not Available | Negative | 1655107 - 1656111 | 36305.1 |
| hypothetical protein | SAMN05421639_102389 | Not Available | Positive | 1656438 - 1657187 | 29181.9 |
| hypothetical protein | SAMN05421639_102390 | Not Available | Positive | 1657257 - 1657862 | 23897.2 |
| protein of unknown function | SAMN05421639_102391 | Not Available | Positive | 1657897 - 1658628 | 27905.0 |
| hypothetical protein | SAMN05421639_102392 | Not Available | Positive | 1658762 - 1659169 | 15789.8 |
| hypothetical protein | SAMN05421639_102393 | Not Available | Positive | 1659170 - 1659304 | 5229.49 |
| predicted nucleotidyltransferase | SAMN05421639_102394 | Not Available | Positive | 1659368 - 1660426 | 40749.5 |
| tfox n-terminal domain-containing protein | SAMN05421639_102395 | Not Available | Negative | 1660497 - 1660841 | 13318.2 |
| protein of unknown function | SAMN05421639_102396 | Not Available | Positive | 1661007 - 1661522 | 20183.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
