Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Chryseobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Chryseobacterium |
| Species | Chryseobacterium shigense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | fresh lactic acid beverage |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1524130 bp
Thymine Count
1537963 bp
Guanine Count
900959 bp
Cytosine Count
932865 bp
Genome Length
4895917 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421639_102287 | Not Available | Negative | 1535723 - 1536088 | 13937.9 |
| acyl-coa dehydrogenase | SAMN05421639_102288 | Not Available | Negative | 1536114 - 1537253 | 41460.8 |
| long-chain acyl-coa synthetase | SAMN05421639_102289 | Not Available | Positive | 1537552 - 1539330 | 66712.9 |
| hypothetical protein | SAMN05421639_102290 | Not Available | Negative | 1539540 - 1540316 | 29966.8 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN05421639_102291 | Not Available | Negative | 1540320 - 1541417 | 40892.0 |
| voltage-gated potassium channel | SAMN05421639_102292 | Not Available | Positive | 1541479 - 1542306 | 32190.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421639_102293 | Not Available | Negative | 1542586 - 1544172 | 56036.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421639_102294 | Not Available | Negative | 1544453 - 1547776 | 114893.0 |
| dna polymerase iii, alpha subunit | SAMN05421639_102295 | Not Available | Negative | 1548143 - 1552810 | 177600.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421639_102296 | Not Available | Positive | 1553239 - 1555371 | 76904.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
